Logo v3.0 beta A high performance bioinformatics pipeline for large-scale
human genomic variation studies
NCBI 36.3/UCSC hg18/Ensembl v56/dbSNP 130 Home separator Info separator About Us separator Help separator FAQ
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Logo provides integrated bioinformatics tools for research in the post-genome era.  There are a number of sub-projects which include:
Variowatch

GenoWatch: A Disease Gene Mining Browser For Association Study
Chen, Y.H., Liu, C.K., Chang, S.C., Lin, Y.J., Tsai, M.F., Chen, Y.T. and Yao, Adam (2008) GenoWatch: a disease gene mining browser for association study, Nucleic Acids Research, doi:10.1093/nar/gkn214 Full Text

FANS: Functional Analysis of Novel SNPs and Mutations in Human and Mouse Genomes
C.K. Liu, Y.H. Chen, C.Y. Tang, S.C. Chang, Y.J. Lin, M.F. Tsai, Y.T. Chen and Adam Yao (2008) Functional analysis of novel SNPs and mutations in human and mouse genomes, BMC Bioinformatics, 9(Suppl 12):S10 doi:10.1186/1471-2105-9-S12-S10 Full Text

VisualSNP: Robust Functional SNP Prioritization Tool

Primerz

PrimerZ: Streamlining Primer Design for Genes and SNPs
Tsai, M.F., Lin, Y.J., Cheng, Y.C., Lee, K.H., Huang, C.C., Chen, Y.T. and Yao, Adam (2007) PrimerZ: streamlined primer design for promoters, exons and human SNPs, Nucleic Acids Research, doi:10.1093/nar/gkm383 Full Text

Qualiseq

QualiSeq: Quality Genomic Sequence Retrieval
Yu-Chang Cheng, Tz-Chao Lin, Kuo-His Lee, Yan-Hau Chen, Ming-Fang Tsai, Yi-Jung Lin, and Adam Yao (2006) Qualiseq: Quality Genomic Sequence Retrieval, JOURNAL OF GENETICS AND MOLECULAR BIOLOGY PDF

Affyrmation

Affyrmation: Affymetrix SNP Chip Marker Affirmation
Chen, Y.H., Tsai, M.F. and Yao, A. (2006) Affyrmation: Online Real-time Affirmation and Annotation for Affymetrix SNP Information, JOURNAL OF GENETICS AND MOLECULAR BIOLOGY PDF